BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035D10SP1|AL430049
(939 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1553 1075 0.0
>3x_Contig1553
Length = 8593
Score = 1075 bits (542), Expect = 0.0
Identities = 543/544 (99%)
Strand = Plus / Plus
Query: 1 atctacattcaagacmgaatagtgaagcgtactgaattagcagggttaggaataattgag 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8050 atctacattcaagacagaatagtgaagcgtactgaattagcagggttaggaataattgag 8109
Query: 61 ttatagggtatcgttttcgattctgatattctttcgttgtttattttcccatcgccacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8110 ttatagggtatcgttttcgattctgatattctttcgttgtttattttcccatcgccacaa 8169
Query: 121 gttttcataagacctctttcttttagcatacgatgggtagacgtaaaattaatatcgagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8170 gttttcataagacctctttcttttagcatacgatgggtagacgtaaaattaatatcgagc 8229
Query: 181 cgataacgcacgagaggaataggaccgtgactttcatcaaacgtaaggccggtttgttca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8230 cgataacgcacgagaggaataggaccgtgactttcatcaaacgtaaggccggtttgttca 8289
Query: 241 agaaagctcacgagttagcggtgttatgtcaagttgatgttgccgtgataattcttggcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8290 agaaagctcacgagttagcggtgttatgtcaagttgatgttgccgtgataattcttggcc 8349
Query: 301 acaacaacacgttttacgagttttcatctgttgacaccaatgatttgattcgtcattatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8350 acaacaacacgttttacgagttttcatctgttgacaccaatgatttgattcgtcattatc 8409
Query: 361 aaagcgatcagttagttcatgatataaaagagccatctgattatggggactacgttaaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8410 aaagcgatcagttagttcatgatataaaagagccatctgattatggggactacgttaaaa 8469
Query: 421 aggaacgcgttgtgctaagacctaatcggaaacgtaatgctgcgaatagaaatgctgcta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8470 aggaacgcgttgtgctaagacctaatcggaaacgtaatgctgcgaatagaaatgctgcta 8529
Query: 481 atgctgctgttggtcctaatgtgggtgccgcagatacatcatcttctgtaaattctcccg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8530 atgctgctgttggtcctaatgtgggtgccgcagatacatcatcttctgtaaattctcccg 8589
Query: 541 attc 544
||||
Sbjct: 8590 attc 8593
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8083
Number of Sequences: 1807
Number of extensions: 8083
Number of successful extensions: 113
Number of sequences better than 1.0e-20: 1
length of query: 939
length of database: 10,358,551
effective HSP length: 16
effective length of query: 923
effective length of database: 10,329,639
effective search space: 9534256797
effective search space used: 9534256797
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)